STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE32963.1Hyaluronan synthase. (499 aa)    
Predicted Functional Partners:
SFF54320.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.845
SFE32895.1
Cellulose binding domain-containing protein.
    
  0.645
SFE52794.1
Amino acid adenylation domain-containing protein.
  
 
 0.588
SFF23659.1
Tetratricopeptide repeat-containing protein.
  
   0.585
SFE94049.1
Signal transduction histidine kinase.
  
  
 0.553
SFF81295.1
Tetratricopeptide repeat-containing protein.
  
   0.546
SFE32753.1
Hypothetical protein.
  
   0.543
SFF44513.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
  
 
 0.519
SFF54826.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
  
 
 0.519
SFF00469.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
 
 
  0.511
Your Current Organism:
Streptomyces alni
NCBI taxonomy Id: 380248
Other names: CGMCC 4.3510, JCM 16122, NRRL B-24611, S. alni, Streptomyces alni Liu et al. 2009, Streptomyces sp. D65, strain D65
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