STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF50294.1Transcriptional attenuator, LytR family. (621 aa)    
Predicted Functional Partners:
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
     
 0.848
SFF50275.1
Hypothetical protein.
       0.847
rsfS
Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.784
SFF34602.1
Hypothetical protein.
  
     0.774
SFE23879.1
Hypothetical protein.
  
     0.773
SFF50265.1
Zn-dependent protease with chaperone function.
       0.772
SFF09304.1
Xanthomonas XOO_2897-like deaminase.
  
     0.771
SFF37152.1
Hypothetical protein.
  
     0.771
SFF69249.1
Hypothetical protein.
  
     0.771
SFF50253.1
Hypothetical protein.
 
     0.770
Your Current Organism:
Streptomyces alni
NCBI taxonomy Id: 380248
Other names: CGMCC 4.3510, JCM 16122, NRRL B-24611, S. alni, Streptomyces alni Liu et al. 2009, Streptomyces sp. D65, strain D65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.