STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF30585.1Ferrous iron transport protein B. (665 aa)    
Predicted Functional Partners:
SDF30613.1
Ferrous iron transport protein A.
 
  
 0.901
SDF49041.1
Ferrous iron transport protein A.
 
  
 0.801
SDF30560.1
Hypothetical protein.
       0.799
SDF30528.1
Hypothetical protein.
       0.795
SDF88596.1
Ferrous iron transport protein A.
 
  
 0.729
SDG02331.1
Asparagine synthase (glutamine-hydrolysing).
       0.449
SDF30499.1
Methylamine methyltransferase corrinoid protein reductive activase.
       0.438
SDF30643.1
Iron (metal) dependent repressor, DtxR family.
  
  
 0.414
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.