STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF36529.14Fe-4S dicluster domain-containing protein. (122 aa)    
Predicted Functional Partners:
SDF36554.1
Formylmethanofuran dehydrogenase subunit C.
       0.809
SDF36489.1
Predicted metal-binding protein; Non-canonical start codon; manually curated.
 
     0.768
SDF22575.1
Mannose-6-phosphate isomerase, cupin superfamily.
 
    0.717
SDG38590.1
Multimeric flavodoxin WrbA.
  
    0.577
SDG21175.1
4Fe-4S binding domain-containing protein.
 
    0.570
SDF96479.1
4Fe-4S binding domain-containing protein.
 
    0.557
SDF93765.1
Pyridoxamine 5'-phosphate oxidase.
   
    0.517
SDF36471.1
Nitrite/Sulfite reductase ferredoxin-like half domain-containing protein.
       0.492
SDF74505.1
Hypothetical protein.
   
    0.442
SDF74540.1
Uncharacterized protein.
   
    0.441
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.