STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF36672.1Protein of unknown function. (188 aa)    
Predicted Functional Partners:
SDF36645.1
Fe-S oxidoreductase.
 
     0.659
SDG26809.1
CO dehydrogenase maturation factor.
  
     0.626
SDG26865.1
acetyl-CoA decarbonylase/synthase gamma subunit.
  
     0.623
SDG26780.1
acetyl-CoA decarbonylase/synthase beta subunit.
  
     0.620
SDG26838.1
acetyl-CoA decarbonylase/synthase delta subunit.
  
     0.600
SDG32358.1
Methylene-tetrahydrofolate reductase C terminal.
  
     0.587
SDG25684.1
CO dehydrogenase maturation factor.
  
     0.586
SDF94790.1
CO dehydrogenase maturation factor.
  
     0.564
SDF22513.1
Formylmethanofuran dehydrogenase, subunit G.
  
     0.554
SDF86006.1
Hypothetical protein.
  
     0.487
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.