STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF44471.1rRNA 2'-O-methyltransferase fibrillarin. (231 aa)    
Predicted Functional Partners:
SDF44440.1
rRNA biogenesis protein Nop56/Nop58.
 
 0.999
SDF97228.1
LSU ribosomal protein L7AE.
  
 0.999
SDF31498.1
SSU ribosomal protein S9P.
 
 0.957
SDF21659.1
Translation initiation factor 6 (aeIF-6).
  
 0.953
SDG10583.1
Nucleolar GTP-binding protein.
  
 0.951
SDF21798.1
SSU ribosomal protein S19E.
  
 0.940
SDG30153.1
LSU ribosomal protein L10P.
 
 0.937
SDF88808.1
Hypothetical protein.
 
 0.931
SDF64809.1
LSU ribosomal protein L30P.
 
 0.929
SDF65438.1
LSU ribosomal protein L22P.
  
 0.923
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.