STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF54389.1PAS/PAC sensor signal transduction histidine kinase. (665 aa)    
Predicted Functional Partners:
SDF25743.1
PAS domain S-box-containing protein.
 
0.925
SDF79026.1
PAS domain S-box-containing protein.
 
0.909
SDG17442.1
PAS domain S-box-containing protein.
 
0.908
SDF48660.1
PAS domain S-box-containing protein.
 
0.906
SDG03959.1
PAS domain S-box-containing protein.
 
  
0.867
SDF79077.1
Response regulator receiver domain-containing protein.
 0.856
SDF66637.1
PAS domain S-box-containing protein.
 
  
0.848
SDF83133.1
Two-component system, cell cycle response regulator.
 0.836
SDF68922.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.834
SDF57003.1
Response regulator receiver domain-containing protein.
 0.832
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.