STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF64295.1Undecaprenyl pyrophosphate synthetase. (293 aa)    
Predicted Functional Partners:
SDF31823.1
Farnesyl-diphosphate synthase.
 
 
 0.911
SDF88226.1
Octaprenyl-diphosphate synthase.
 
 
 0.813
SDG02934.1
PDZ domain-containing protein.
 
  
 0.736
SDF35412.1
N utilization substance protein A.
 
    0.721
SDF44209.1
Uridylate kinase.
  
  
 0.654
SDF83415.1
valyl-tRNA synthetase.
 
   
 0.653
SDF86063.1
CTP synthase.
 
    0.638
SDF45137.1
Undecaprenyl diphosphate synthase.
  
  
0.633
SDF54567.1
Undecaprenyl-diphosphatase.
 
  
 0.632
SDF64254.1
Protein of unknown function.
       0.630
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.