STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF66939.1Hypothetical protein. (359 aa)    
Predicted Functional Partners:
SDF66972.1
Acetyltransferase.
 
  
 0.980
SDG10073.1
acetyl-CoA C-acetyltransferase.
    
 0.836
SDF86785.1
F420H2 dehydrogenase subunit I.
   
 
 0.825
SDF22342.1
Citrate synthase.
     
 0.824
SDF29197.1
Pyruvate carboxylase subunit B.
    
 0.824
SDF29157.1
Pyruvate carboxylase subunit A.
     
 0.793
SDG20420.1
Pyruvate ferredoxin oxidoreductase, delta subunit.
     
 0.770
SDF57670.1
Protein N-acetyltransferase, RimJ/RimL family.
    
 0.603
SDG01852.1
Protein N-acetyltransferase, RimJ/RimL family.
    
 0.603
SDF66908.1
Acetyl-coenzyme A synthetase.
 
  
 0.598
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.