STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF68055.1Electron transport complex protein RnfD. (338 aa)    
Predicted Functional Partners:
SDF67953.1
Electron transport complex protein RnfA.
 
   
 0.958
SDF67988.1
Electron transport complex protein RnfE.
 
   
 0.958
SDF68021.1
Electron transport complex protein RnfG.
 
   
 0.954
SDF68098.1
Electron transport complex protein RnfC.
 
     0.944
SDF67917.1
Electron transport complex protein RnfB.
 
     0.939
SDF68195.1
Thiamine biosynthesis lipoprotein.
 
   
 0.834
SDF67875.1
Uncharacterized membrane protein.
       0.809
SDF67841.1
Replication factor C small subunit.
       0.798
SDF68130.1
Methanogenesis multiheme c-type cytochrome.
       0.798
SDF67810.1
Uncharacterized membrane protein.
       0.791
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.