STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF69656.1Predicted transcriptional regulator. (128 aa)    
Predicted Functional Partners:
SDF67359.1
Predicted DNA-binding transcriptional regulator, ArsR family.
  
     0.742
SDG12213.1
Presenilin-like membrane protease, A22 family.
  
     0.684
SDF85546.1
Hypothetical protein.
  
     0.672
SDF83346.1
Hypothetical protein.
  
     0.626
SDF64656.1
Uncharacterized membrane protein, DUF106 family.
  
     0.621
SDF68491.1
DNA replication factor GINS.
  
     0.596
SDF52173.1
Sporulation protein YlmC, PRC-barrel domain family.
  
     0.565
SDF92559.1
Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif.
  
     0.562
SDF69629.1
Enolase.
       0.533
SDF57429.1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase.
  
     0.525
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.