STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF70362.1Putative methanogenesis marker protein 14. (478 aa)    
Predicted Functional Partners:
SDF70394.1
Thioredoxin.
       0.809
SDF53193.1
Tetrahydromethanopterin S-methyltransferase, subunit G.
 
     0.783
SDF53300.1
Tetrahydromethanopterin S-methyltransferase, subunit B.
 
     0.780
SDF53335.1
Tetrahydromethanopterin S-methyltransferase, subunit C.
 
     0.779
SDF53379.1
Tetrahydromethanopterin S-methyltransferase, subunit D.
 
     0.779
SDF53418.1
Tetrahydromethanopterin S-methyltransferase, subunit E.
 
     0.779
SDF53259.1
Tetrahydromethanopterin S-methyltransferase, subunit A.
 
     0.772
SDF34228.1
Methanogenesis marker radical SAM protein.
 
     0.756
SDF53163.1
Tetrahydromethanopterin S-methyltransferase, subunit H.
 
     0.752
SDF34311.1
Methyl-coenzyme M reductase subunit D.
 
     0.724
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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