STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF71205.12-octaprenylphenol hydroxylase. (559 aa)    
Predicted Functional Partners:
SDF71239.1
Hypothetical protein.
       0.583
SDF44440.1
rRNA biogenesis protein Nop56/Nop58.
    
  0.559
SDF96737.1
Pyridoxal phosphate synthase yaaD subunit.
    
  0.519
SDF64584.1
tRNA pseudouridine synthase B.
    
  0.504
SDF88413.1
Porphobilinogen synthase.
    
 0.498
SDF71176.1
Protein of unknown function.
       0.483
SDF35507.1
Translation elongation factor 2 (EF-2/EF-G).
    
 0.478
SDF88387.1
glutamyl-tRNA reductase.
    
 0.469
SDF31889.1
snoRNP protein GAR1.
   
 
  0.453
SDF71121.1
Polyhydroxyalkanoate synthesis regulator phasin.
 
     0.431
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.