STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF80051.1Hypothetical protein. (232 aa)    
Predicted Functional Partners:
SDF85546.1
Hypothetical protein.
  
     0.643
SDF23699.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.639
SDF80080.1
Predicted transcriptional regulator.
       0.599
SDF55368.1
Hypothetical protein.
  
     0.574
SDF64114.1
Hypothetical protein.
  
     0.571
SDG24354.1
Uncharacterized conserved protein, DUF169 family.
  
     0.569
SDG21577.1
Predicted transcriptional regulator, containsd two HTH domains.
  
     0.558
SDF35808.1
Hypothetical protein.
  
     0.536
SDF57363.1
Hypothetical protein.
  
     0.532
SDG32334.1
Predicted transcriptional regulator, containsd two HTH domains.
  
     0.523
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.