Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF49136.1 | SDF49274.1 | SAMN04488589_0681 | SAMN04488589_0685 | Cobalt-factor II C20-methyltransferase. | Precorrin-3 methyltransferase. | 0.998 |
SDF49136.1 | SDF57897.1 | SAMN04488589_0681 | SAMN04488589_0938 | Cobalt-factor II C20-methyltransferase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.540 |
SDF49136.1 | SDF83669.1 | SAMN04488589_0681 | SAMN04488589_1474 | Cobalt-factor II C20-methyltransferase. | uroporphyrinogen-III synthase; Manually curated. | 0.826 |
SDF49136.1 | SDF83702.1 | SAMN04488589_0681 | SAMN04488589_1475 | Cobalt-factor II C20-methyltransferase. | uroporphyrinogen-III C-methyltransferase. | 0.924 |
SDF49136.1 | SDF88344.1 | SAMN04488589_0681 | SAMN04488589_1648 | Cobalt-factor II C20-methyltransferase. | Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | 0.874 |
SDF49136.1 | SDF88387.1 | SAMN04488589_0681 | SAMN04488589_1649 | Cobalt-factor II C20-methyltransferase. | glutamyl-tRNA reductase. | 0.490 |
SDF49136.1 | SDF88440.1 | SAMN04488589_0681 | SAMN04488589_1651 | Cobalt-factor II C20-methyltransferase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.540 |
SDF49136.1 | SDF88463.1 | SAMN04488589_0681 | SAMN04488589_1652 | Cobalt-factor II C20-methyltransferase. | Hydroxymethylbilane synthase. | 0.849 |
SDF49274.1 | SDF49136.1 | SAMN04488589_0685 | SAMN04488589_0681 | Precorrin-3 methyltransferase. | Cobalt-factor II C20-methyltransferase. | 0.998 |
SDF49274.1 | SDF83669.1 | SAMN04488589_0685 | SAMN04488589_1474 | Precorrin-3 methyltransferase. | uroporphyrinogen-III synthase; Manually curated. | 0.851 |
SDF49274.1 | SDF83702.1 | SAMN04488589_0685 | SAMN04488589_1475 | Precorrin-3 methyltransferase. | uroporphyrinogen-III C-methyltransferase. | 0.901 |
SDF49274.1 | SDF88344.1 | SAMN04488589_0685 | SAMN04488589_1648 | Precorrin-3 methyltransferase. | Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | 0.854 |
SDF57897.1 | SDF49136.1 | SAMN04488589_0938 | SAMN04488589_0681 | Glutamate-1-semialdehyde 2,1-aminomutase. | Cobalt-factor II C20-methyltransferase. | 0.540 |
SDF57897.1 | SDF83669.1 | SAMN04488589_0938 | SAMN04488589_1474 | Glutamate-1-semialdehyde 2,1-aminomutase. | uroporphyrinogen-III synthase; Manually curated. | 0.703 |
SDF57897.1 | SDF83702.1 | SAMN04488589_0938 | SAMN04488589_1475 | Glutamate-1-semialdehyde 2,1-aminomutase. | uroporphyrinogen-III C-methyltransferase. | 0.664 |
SDF57897.1 | SDF88344.1 | SAMN04488589_0938 | SAMN04488589_1648 | Glutamate-1-semialdehyde 2,1-aminomutase. | Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | 0.615 |
SDF57897.1 | SDF88387.1 | SAMN04488589_0938 | SAMN04488589_1649 | Glutamate-1-semialdehyde 2,1-aminomutase. | glutamyl-tRNA reductase. | 0.898 |
SDF57897.1 | SDF88413.1 | SAMN04488589_0938 | SAMN04488589_1650 | Glutamate-1-semialdehyde 2,1-aminomutase. | Porphobilinogen synthase. | 0.908 |
SDF57897.1 | SDF88463.1 | SAMN04488589_0938 | SAMN04488589_1652 | Glutamate-1-semialdehyde 2,1-aminomutase. | Hydroxymethylbilane synthase. | 0.813 |
SDF67542.1 | SDF83669.1 | SAMN04488589_1089 | SAMN04488589_1474 | NhaP-type Na+/H+ or K+/H+ antiporter. | uroporphyrinogen-III synthase; Manually curated. | 0.698 |
page 1 of 4