STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF83838.1Glycerol uptake facilitator protein. (249 aa)    
Predicted Functional Partners:
SDF83874.1
Hypothetical protein.
 
    0.944
SDF67542.1
NhaP-type Na+/H+ or K+/H+ antiporter.
  
 
 0.844
SDF35874.1
Putative hydrolase of the HAD superfamily.
  
 0.804
SDF51466.1
Putative hydrolase of the HAD superfamily.
  
 0.804
SDF57767.1
Putative hydrolase of the HAD superfamily.
  
 0.804
SDG29211.1
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
   
 0.800
SDF97133.1
Nucleoside diphosphate kinase.
  
 
 0.798
SDF87228.1
Molecular chaperone DnaJ.
   
 
 0.792
SDG09041.1
arginyl-tRNA synthetase.
  
 
  0.645
SDF83212.1
prolyl-tRNA synthetase.
  
 
 0.625
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.