STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF88808.1Hypothetical protein. (260 aa)    
Predicted Functional Partners:
SDF31463.1
LSU ribosomal protein L13P.
  
 
 0.999
SDF64774.1
LSU ribosomal protein L15P.
    
   0.999
SDF65220.1
LSU ribosomal protein L24P.
  
 
 0.999
SDF65254.1
LSU ribosomal protein L14P.
    
 
 0.999
SDF65606.1
LSU ribosomal protein L3P.
  
 
 0.999
SDG10583.1
Nucleolar GTP-binding protein.
  
 0.995
SDF80595.1
SSU ribosomal protein S8E.
   
 0.984
SDG30153.1
LSU ribosomal protein L10P.
  
 0.981
SDF64584.1
tRNA pseudouridine synthase B.
 
 0.980
SDF34692.1
23S rRNA Um-2552 2'-O-methyltransferase.
   
 0.979
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.