STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF96761.1Pyridoxal phosphate synthase yaaE subunit. (197 aa)    
Predicted Functional Partners:
SDF96737.1
Pyridoxal phosphate synthase yaaD subunit.
 0.999
SDF80908.1
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
    
 0.851
SDG25081.1
Inosine-guanosine kinase /cytidine kinase.
     
 0.803
SDF93904.1
Ribose-5-phosphate isomerase.
     
 0.774
SDF96803.1
DNA helicase-4.
       0.591
SDF47953.1
Fructokinase; Non-canonical start codon; manually curated.
     
 0.544
SDF96715.1
DNA gyrase subunit A.
       0.483
SDF33685.1
DNA topoisomerase I.
       0.480
SDF96687.1
DNA gyrase subunit B.
       0.476
SDF66476.1
Arsenate reductase.
    
  0.471
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.