Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF30380.1 | SDF92720.1 | SAMN04488589_0285 | SAMN04488589_1700 | Methanol:corrinoid methyltransferase. | [methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase. | 0.609 |
SDF30380.1 | SDG04186.1 | SAMN04488589_0285 | SAMN04488589_2008 | Methanol:corrinoid methyltransferase. | methylmalonyl-CoA mutase C-terminal domain-containing protein/methyltransferase cognate corrinoid proteins. | 0.725 |
SDF30380.1 | SDG04201.1 | SAMN04488589_0285 | SAMN04488589_2009 | Methanol:corrinoid methyltransferase. | [methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase. | 0.606 |
SDF30380.1 | SDG04770.1 | SAMN04488589_0285 | SAMN04488589_2030 | Methanol:corrinoid methyltransferase. | Uroporphyrinogen decarboxylase. | 0.722 |
SDF30380.1 | SDG08951.1 | SAMN04488589_0285 | SAMN04488589_2118 | Methanol:corrinoid methyltransferase. | Methylamine-specific methylcobalamin:coenzyme M methyltransferase. | 0.614 |
SDF30380.1 | SDG14689.1 | SAMN04488589_0285 | SAMN04488589_2267 | Methanol:corrinoid methyltransferase. | Methanol:corrinoid methyltransferase. | 0.521 |
SDF30380.1 | SDG15592.1 | SAMN04488589_0285 | SAMN04488589_2296 | Methanol:corrinoid methyltransferase. | [methyl-Co(III) methanol-specific corrinoid protein]:coenzyme M methyltransferase. | 0.777 |
SDF30380.1 | SDG36502.1 | SAMN04488589_0285 | SAMN04488589_2813 | Methanol:corrinoid methyltransferase. | [methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase. | 0.608 |
SDF30380.1 | SDG39320.1 | SAMN04488589_0285 | SAMN04488589_2883 | Methanol:corrinoid methyltransferase. | Trimethylamine:corrinoid methyltransferase; Manually curated. | 0.936 |
SDF30380.1 | SDG39673.1 | SAMN04488589_0285 | SAMN04488589_2897 | Methanol:corrinoid methyltransferase. | Methyltransferase, MtaA/CmuA family; Partial gene; manually curated. | 0.681 |
SDF92720.1 | SDF30380.1 | SAMN04488589_1700 | SAMN04488589_0285 | [methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase. | Methanol:corrinoid methyltransferase. | 0.609 |
SDF92720.1 | SDG04186.1 | SAMN04488589_1700 | SAMN04488589_2008 | [methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase. | methylmalonyl-CoA mutase C-terminal domain-containing protein/methyltransferase cognate corrinoid proteins. | 0.489 |
SDF92720.1 | SDG04770.1 | SAMN04488589_1700 | SAMN04488589_2030 | [methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase. | Uroporphyrinogen decarboxylase. | 0.766 |
SDF92720.1 | SDG14689.1 | SAMN04488589_1700 | SAMN04488589_2267 | [methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase. | Methanol:corrinoid methyltransferase. | 0.627 |
SDF92720.1 | SDG39320.1 | SAMN04488589_1700 | SAMN04488589_2883 | [methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase. | Trimethylamine:corrinoid methyltransferase; Manually curated. | 0.848 |
SDG04186.1 | SDF30380.1 | SAMN04488589_2008 | SAMN04488589_0285 | methylmalonyl-CoA mutase C-terminal domain-containing protein/methyltransferase cognate corrinoid proteins. | Methanol:corrinoid methyltransferase. | 0.725 |
SDG04186.1 | SDF92720.1 | SAMN04488589_2008 | SAMN04488589_1700 | methylmalonyl-CoA mutase C-terminal domain-containing protein/methyltransferase cognate corrinoid proteins. | [methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase. | 0.489 |
SDG04186.1 | SDG04201.1 | SAMN04488589_2008 | SAMN04488589_2009 | methylmalonyl-CoA mutase C-terminal domain-containing protein/methyltransferase cognate corrinoid proteins. | [methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase. | 0.681 |
SDG04186.1 | SDG04770.1 | SAMN04488589_2008 | SAMN04488589_2030 | methylmalonyl-CoA mutase C-terminal domain-containing protein/methyltransferase cognate corrinoid proteins. | Uroporphyrinogen decarboxylase. | 0.500 |
SDG04186.1 | SDG08951.1 | SAMN04488589_2008 | SAMN04488589_2118 | methylmalonyl-CoA mutase C-terminal domain-containing protein/methyltransferase cognate corrinoid proteins. | Methylamine-specific methylcobalamin:coenzyme M methyltransferase. | 0.486 |
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