STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG05578.1Glyoxylase, beta-lactamase superfamily II. (233 aa)    
Predicted Functional Partners:
SDF54889.1
Glyoxylase, beta-lactamase superfamily II.
 
 0.981
SDF58710.1
Phosphoadenosine phosphosulfate reductase.
  
 
 0.838
SDG19145.1
Glyoxylase, beta-lactamase superfamily II.
  
  
 
0.808
SDF82836.1
Ribosomal RNA-processing protein RRP41/SKI6.
 
 
 0.750
SDF43796.1
tRNA pseudouridine38-40 synthase.
   
 
 0.709
SDF31320.1
D-3-phosphoglycerate dehydrogenase.
 
  
 0.684
SDG30322.1
Ribonuclease P protein subunit Rpp21.
   
 
  0.663
SDF80837.1
LSU ribosomal protein L37E; Manually curated.
 
   0.653
SDG24607.1
Oxidoreductase molybdopterin binding domain-containing protein.
 
 
 0.628
SDF66476.1
Arsenate reductase.
  
 
 0.606
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.