Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF92837.1 | SDF92966.1 | SAMN04488589_1705 | SAMN04488589_1712 | Monomethylamine:corrinoid methyltransferase; Manually curated. | Pyrrolysine biosynthesis protein PylB. | 0.607 |
SDF92837.1 | SDG08596.1 | SAMN04488589_1705 | SAMN04488589_2107 | Monomethylamine:corrinoid methyltransferase; Manually curated. | pyrrolysyl-tRNA synthetase; Partial gene; manually curated. | 0.723 |
SDF92837.1 | SDG15398.1 | SAMN04488589_1705 | SAMN04488589_2290 | Monomethylamine:corrinoid methyltransferase; Manually curated. | B12 binding domain-containing protein. | 0.738 |
SDF92837.1 | SDG39320.1 | SAMN04488589_1705 | SAMN04488589_2883 | Monomethylamine:corrinoid methyltransferase; Manually curated. | Trimethylamine:corrinoid methyltransferase; Manually curated. | 0.941 |
SDF92837.1 | SDG39865.1 | SAMN04488589_1705 | SAMN04488589_2898 | Monomethylamine:corrinoid methyltransferase; Manually curated. | Pyrrolysine biosynthesis protein PylD; Partial gene; manually curated. | 0.705 |
SDF92837.1 | SDG39911.1 | SAMN04488589_1705 | SAMN04488589_2899 | Monomethylamine:corrinoid methyltransferase; Manually curated. | Pyrrolysine biosynthesis protein PylC; Partial gene; manually curated. | 0.683 |
SDF92966.1 | SDF92837.1 | SAMN04488589_1712 | SAMN04488589_1705 | Pyrrolysine biosynthesis protein PylB. | Monomethylamine:corrinoid methyltransferase; Manually curated. | 0.607 |
SDF92966.1 | SDG08596.1 | SAMN04488589_1712 | SAMN04488589_2107 | Pyrrolysine biosynthesis protein PylB. | pyrrolysyl-tRNA synthetase; Partial gene; manually curated. | 0.799 |
SDF92966.1 | SDG08885.1 | SAMN04488589_1712 | SAMN04488589_2115 | Pyrrolysine biosynthesis protein PylB. | Monomethylamine:corrinoid methyltransferase. | 0.613 |
SDF92966.1 | SDG08921.1 | SAMN04488589_1712 | SAMN04488589_2117 | Pyrrolysine biosynthesis protein PylB. | Monomethylamine:corrinoid methyltransferase. | 0.638 |
SDF92966.1 | SDG15398.1 | SAMN04488589_1712 | SAMN04488589_2290 | Pyrrolysine biosynthesis protein PylB. | B12 binding domain-containing protein. | 0.616 |
SDF92966.1 | SDG39320.1 | SAMN04488589_1712 | SAMN04488589_2883 | Pyrrolysine biosynthesis protein PylB. | Trimethylamine:corrinoid methyltransferase; Manually curated. | 0.518 |
SDF92966.1 | SDG39542.1 | SAMN04488589_1712 | SAMN04488589_2891 | Pyrrolysine biosynthesis protein PylB. | Monomethylamine:corrinoid methyltransferase. | 0.611 |
SDF92966.1 | SDG39562.1 | SAMN04488589_1712 | SAMN04488589_2893 | Pyrrolysine biosynthesis protein PylB. | Monomethylamine:corrinoid methyltransferase. | 0.641 |
SDF92966.1 | SDG39865.1 | SAMN04488589_1712 | SAMN04488589_2898 | Pyrrolysine biosynthesis protein PylB. | Pyrrolysine biosynthesis protein PylD; Partial gene; manually curated. | 0.808 |
SDF92966.1 | SDG39911.1 | SAMN04488589_1712 | SAMN04488589_2899 | Pyrrolysine biosynthesis protein PylB. | Pyrrolysine biosynthesis protein PylC; Partial gene; manually curated. | 0.930 |
SDG08596.1 | SDF92837.1 | SAMN04488589_2107 | SAMN04488589_1705 | pyrrolysyl-tRNA synthetase; Partial gene; manually curated. | Monomethylamine:corrinoid methyltransferase; Manually curated. | 0.723 |
SDG08596.1 | SDF92966.1 | SAMN04488589_2107 | SAMN04488589_1712 | pyrrolysyl-tRNA synthetase; Partial gene; manually curated. | Pyrrolysine biosynthesis protein PylB. | 0.799 |
SDG08596.1 | SDG08885.1 | SAMN04488589_2107 | SAMN04488589_2115 | pyrrolysyl-tRNA synthetase; Partial gene; manually curated. | Monomethylamine:corrinoid methyltransferase. | 0.743 |
SDG08596.1 | SDG08921.1 | SAMN04488589_2107 | SAMN04488589_2117 | pyrrolysyl-tRNA synthetase; Partial gene; manually curated. | Monomethylamine:corrinoid methyltransferase. | 0.746 |
page 1 of 5