STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG09676.1SagB-type dehydrogenase domain-containing protein. (244 aa)    
Predicted Functional Partners:
SDG09651.1
Pathogenicity locus.
       0.743
SDF92198.1
fatty-acyl-CoA synthase.
   
 
 0.695
SDG09711.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
     
 0.671
SDF55114.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
  
 0.572
SDF29123.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
 
    0.516
SDG09746.1
DNA-3-methyladenine glycosylase I.
       0.507
SDF21963.1
Hypothetical protein.
  
  
 0.503
SDF23060.1
ABC-2 type transport system permease protein.
  
  
 0.488
SDF44927.1
Lipooligosaccharide transport system permease protein.
  
  
 0.488
SDF50538.1
ABC-2 type transport system permease protein.
  
  
 0.488
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.