STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG21936.1Transglutaminase-like superfamily protein. (199 aa)    
Predicted Functional Partners:
SDG21971.1
SnoaL-like domain-containing protein.
       0.678
SDG35452.1
Excinuclease ABC subunit B.
    
 0.677
SDF52286.1
Excinuclease ABC subunit C.
    
 0.666
SDG38055.1
Excinuclease ABC subunit A.
    
  0.659
SDF46287.1
DNA mismatch repair protein MutL.
    
  0.623
SDG02331.1
Asparagine synthase (glutamine-hydrolysing).
     
 0.522
SDG21901.1
Predicted transcriptional regulator, containsd two HTH domains.
       0.479
SDF96237.1
Protein of unknown function DUF58.
  
  
 0.437
SDG05664.1
Protein of unknown function DUF58.
  
  
 0.437
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.