STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG25362.1Peptide/nickel transport system substrate-binding protein. (576 aa)    
Predicted Functional Partners:
SDG25389.1
Peptide/nickel transport system permease protein.
 0.998
SDG25417.1
Peptide/nickel transport system permease protein.
 0.998
SDG25448.1
Peptide/nickel transport system ATP-binding protein.
 
 
 0.998
SDG25472.1
Peptide/nickel transport system ATP-binding protein.
 
 0.997
SDG25564.1
Peptide/nickel transport system permease protein.
 0.996
SDG25591.1
Peptide/nickel transport system permease protein.
 0.961
SDG25535.1
Peptide/nickel transport system ATP-binding protein.
 
 
 0.904
SDG25335.1
Formylmethanofuran dehydrogenase, subunit E.
 
     0.817
SDG05132.1
ABC-type amino acid transport substrate-binding protein.
 
 
 0.775
SDF71088.1
Methyl coenzyme M reductase system, component A2.
 
 
 0.748
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.