STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG25509.1ABC-2 type transport system ATP-binding protein. (327 aa)    
Predicted Functional Partners:
SDF80176.1
ABC-2 type transport system permease protein.
 
 
 0.932
SDF50538.1
ABC-2 type transport system permease protein.
 
 
 0.931
SDF23060.1
ABC-2 type transport system permease protein.
 
 0.913
SDG25564.1
Peptide/nickel transport system permease protein.
   
 0.905
SDG25591.1
Peptide/nickel transport system permease protein.
    
 0.905
SDG25535.1
Peptide/nickel transport system ATP-binding protein.
    
0.898
SDG25647.1
Peptide/nickel transport system substrate-binding protein.
    
 0.891
SDF44927.1
Lipooligosaccharide transport system permease protein.
 
 
 0.873
SDG11608.1
ABC-2 family transporter protein.
  
 0.829
SDG11639.1
ABC-2 type transport system permease protein.
  
 0.829
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.