STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG26439.1TIGR00267 family protein. (185 aa)    
Predicted Functional Partners:
SDF34631.1
Hypothetical protein; Manually curated.
 
     0.770
SDG26400.1
cation:H+ antiporter.
 
   
 0.602
SDG26467.1
Hypothetical protein.
       0.550
SDG04503.1
Hypothetical protein.
  
     0.541
SDF79512.1
Thymidylate synthase.
  
     0.518
SDG24998.1
Hypothetical protein.
 
     0.503
SDG26498.1
Hypothetical protein.
       0.495
SDF22842.1
TolB protein.
       0.457
SDF68649.1
H/ACA ribonucleoprotein complex subunit 3; Manually curated.
  
     0.453
SDG26585.1
NAD+ kinase.
 
     0.431
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.