STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG33317.1ATP-binding cassette, sub-family E, member 1. (590 aa)    
Predicted Functional Partners:
SDG09017.1
Peptide chain release factor subunit 1 (aeRF-1).
  
 
 0.948
SDF65164.1
SSU ribosomal protein S4E.
  
 
 0.928
SDF84788.1
SSU ribosomal protein S3AE.
  
 
 0.920
SDF84363.1
SSU ribosomal protein S15P.
  
 
 0.918
SDF27487.1
Translation initiation factor 2 subunit gamma (aeIF-2g); Manually curated.
  
 
 0.917
SDF92559.1
Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif.
   
 0.915
SDF50134.1
Translation initiation factor 2 subunit beta (aeIF-2b).
  
 
 0.907
SDG20910.1
Peptide chain release factor subunit 1.
  
 
 0.899
SDG30153.1
LSU ribosomal protein L10P.
  
 
 0.899
SDF83065.1
LSU ribosomal protein L15E.
 
   0.894
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.