STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG33465.1ABC-type Na+ efflux pump, permease component. (602 aa)    
Predicted Functional Partners:
SDG33449.1
ABC-type Na+ efflux pump, permease component.
       0.746
SDG33510.1
ABC-2 type transport system ATP-binding protein.
  
 
 0.719
SDF23060.1
ABC-2 type transport system permease protein.
  
 
 0.693
SDF44927.1
Lipooligosaccharide transport system permease protein.
  
 
 0.693
SDF50538.1
ABC-2 type transport system permease protein.
  
 
 0.693
SDF80176.1
ABC-2 type transport system permease protein.
  
 
 0.693
SDG33427.1
Hypothetical protein.
       0.690
SDG09187.1
Osmoprotectant transport system substrate-binding protein.
    
  0.667
SDF55043.1
Zinc transport system permease protein.
    
  0.661
SDF94439.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
    
 0.656
Your Current Organism:
Methanolobus vulcani
NCBI taxonomy Id: 38026
Other names: DSM 3029, M. vulcani, OCM 157, strain PL-12/M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.