STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_0082Putative inner membrane symporter protein. (459 aa)    
Predicted Functional Partners:
XALC_0083
Putative ndvb protein (glycosyltransferase family 36).
 
     0.839
XALC_0081
Putative gluconokinase protein.
       0.542
XALC_3147
Putative tonb-dependent outer membrane receptor protein.
  
     0.508
XALC_0059
Putative xylan 1,4-beta-xylosidase protein; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.426
XALC_3148
Hypothetical sapc-related protein.
  
     0.419
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.