STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_0320Putative tonb-dependent outer membrane receptor protein. (959 aa)    
Predicted Functional Partners:
XALC_0646
Putative tonb-dependent outer membrane receptor protein.
  
   
 0.748
XALC_0659
Putative tonb-dependent outer membrane receptor protein.
  
    0.748
XALC_2216
Putative tonb-dependent outer membrane receptor protein.
  
     0.719
XALC_0368
Putative tonb-dependent outer membrane receptor protein.
  
    0.687
XALC_0553
Putative tonb-dependent outer membrane receptor protein.
  
     0.683
XALC_2518
Putative tonb-dependent outer membrane receptor protein.
  
    0.665
XALC_2853
Putative o-antigen polymerase protein.
  
     0.654
XALC_2214
Putative tonb-dependent outer membrane receptor protein.
  
     0.650
XALC_0643
Putative tonb-dependent outer membrane receptor protein.
  
    0.635
XALC_0008
Putative energy transducer tonb protein.
  
   0.621
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.