STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_0335Hypothetical protein. (117 aa)    
Predicted Functional Partners:
XALC_0334
Hypothetical anti-sigma factor antagonist transcription regulator protein.
 
 
 0.997
XALC_0336
Putative regulatory protein.
 
 
 0.995
XALC_1371
Putative anti-sigma factor antagonist protein.
  
 
 0.956
XALC_1974
Putative two-component system sensor-response regulator hybrid protein.
 
  
 0.950
XALC_2101
Putative two-component system sensor-response regulator hybrid protein.
 
  
 0.948
fliG
Probable flagellar motor switch protein flig; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
   
    0.928
flgK
Probable flagellar hook-associated protein 1 (hap1); Belongs to the flagella basal body rod proteins family.
   
    0.928
flgH
Probable flagellar l-ring protein precursor (basal body l-ring protein); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.928
flgB
Probable flagellar basal body protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.928
XALC_0297
Hypothetical two-component system sensor-response regulator hybrid protein.
 
  
 0.914
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.