STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_0454Conserved hypothetical protein. (75 aa)    
Predicted Functional Partners:
glnS
Probable glutaminyl-trna synthetase (glutamine--trna ligase)(glnrs) protein.
       0.628
XALC_0085
Putative two-component system sensor/regulator hybrid protein.
  
 
 0.588
gltB-2
Probable glutamate synthase, alpha subunit protein.
  
  
 0.519
XALC_1974
Putative two-component system sensor-response regulator hybrid protein.
   
 
 0.503
XALC_2101
Putative two-component system sensor-response regulator hybrid protein.
   
 
 0.503
XALC_0455
Hypothetical protein.
       0.477
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.