STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pipProbable proline iminopeptidase (pip) protein; Belongs to the peptidase S33 family. (313 aa)    
Predicted Functional Partners:
XALC_0088
Hypothetical protein.
     
  0.900
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
  0.900
proC
Probable pyrroline-5-carboxylate reductase (p5cr) protein; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
  0.900
acpP
Probable acyl carrier protein (acp); Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.667
albI
Polyketide non-ribosomal peptide synthase; albicidin synthetase protein.
  
 
 0.654
XALC_1057
Probable non-ribosomal peptide synthetase protein.
  
 
 0.620
XALC_1058
Probable non-ribosomal peptide synthetase protein.
  
 
 0.620
hemK
Probable methyltransferase hemk protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
  
    0.589
XALC_3006
Hypothetical hydrolase precursor protein.
  
     0.487
ahpC
Probable alkyl hydroperoxide reductase subunit c (thioredoxin peroxidase) protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
     
 0.435
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
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