Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
XALC_0557 | XALC_0558 | XALC_0557 | XALC_0558 | Putative ompa family outer membrane protein precursor. | Hypothetical secreted protein. | 0.536 |
XALC_0557 | amiC-2 | XALC_0557 | XALC_1199 | Putative ompa family outer membrane protein precursor. | Probable n-acetylmuramoyl-l-alanine amidase precursor protein. | 0.413 |
XALC_0558 | XALC_0557 | XALC_0558 | XALC_0557 | Hypothetical secreted protein. | Putative ompa family outer membrane protein precursor. | 0.536 |
XALC_0558 | amiC-2 | XALC_0558 | XALC_1199 | Hypothetical secreted protein. | Probable n-acetylmuramoyl-l-alanine amidase precursor protein. | 0.477 |
XALC_0558 | rluB | XALC_0558 | XALC_0559 | Hypothetical secreted protein. | Probable pseudouridylate synthase protein; Belongs to the pseudouridine synthase RsuA family. | 0.696 |
amiC-2 | XALC_0557 | XALC_1199 | XALC_0557 | Probable n-acetylmuramoyl-l-alanine amidase precursor protein. | Putative ompa family outer membrane protein precursor. | 0.413 |
amiC-2 | XALC_0558 | XALC_1199 | XALC_0558 | Probable n-acetylmuramoyl-l-alanine amidase precursor protein. | Hypothetical secreted protein. | 0.477 |
rluB | XALC_0558 | XALC_0559 | XALC_0558 | Probable pseudouridylate synthase protein; Belongs to the pseudouridine synthase RsuA family. | Hypothetical secreted protein. | 0.696 |