STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_0645Putative haloacid dehalogenase-like hydrolase protein. (218 aa)    
Predicted Functional Partners:
XALC_1221
Putative aldehyde dehydrogenase protein; Belongs to the aldehyde dehydrogenase family.
     
  0.900
XALC_0644
Putative inosine-uridine preferring nucleoside hydrolase precursor protein; Belongs to the IUNH family.
  
  
 0.621
albI
Polyketide non-ribosomal peptide synthase; albicidin synthetase protein.
  
 
 0.512
ribD
Probable riboflavin biosynthesis ribd oxidoreductase protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.475
XALC_0646
Putative tonb-dependent outer membrane receptor protein.
       0.458
XALC_0643
Putative tonb-dependent outer membrane receptor protein.
       0.453
nadE
Putative nad(+) synthase (glutamine-hydrolyzing) protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
 
  
 0.442
XALC_0647
Hypothetical glycerophosphodiester phosphodiesterase protein.
       0.433
XALC_1305
Hypothetical adhesin protein.
  
     0.401
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
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