STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_0862Putative alcohol dehydrogenase class III protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (369 aa)    
Predicted Functional Partners:
XALC_0863
Putative esterase protein; Serine hydrolase involved in the detoxification of formaldehyde.
 0.999
XALC_0389
Putative zinc-containing alcohol dehydrogenase superfamily protein.
  
 
0.932
XALC_1049
Putative zinc-containing alcohol dehydrogenase superfamily protein.
  
 
0.932
XALC_1221
Putative aldehyde dehydrogenase protein; Belongs to the aldehyde dehydrogenase family.
 
 0.914
XALC_0861
Hypothetical protein.
  
  
 0.890
maeB
Probable nadp-dependent malic enzyme protein.
  
  
 0.440
albI
Polyketide non-ribosomal peptide synthase; albicidin synthetase protein.
  
  
 0.436
tadA
Putative cytidine / deoxycytidylate deaminase protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.409
XALC_2747
Conserved hypothetical protein.
  
    0.409
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
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