STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_1327Hypothetical fad linked oxidase protein. (462 aa)    
Predicted Functional Partners:
plsB
Probable glycerol-3-phosphate o-acyltransferase (gpat) protein; Belongs to the GPAT/DAPAT family.
  
 
 0.666
XALC_1329
Hypothetical protein.
 
     0.638
serA-2
Probable d-3-phosphoglycerate dehydrogenase protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.636
XALC_1057
Probable non-ribosomal peptide synthetase protein.
  
 
 0.578
XALC_1058
Probable non-ribosomal peptide synthetase protein.
  
 
 0.578
albI
Polyketide non-ribosomal peptide synthase; albicidin synthetase protein.
  
 
 0.575
lldD
Probable l-lactate dehydrogenase [cytochrome] protein; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.
  
 0.574
etfA
Probable electron transfer flavoprotein alpha subunit.
 
 
 0.526
ubiA
Probable 4-hydroxybenzoate octaprenyltransferase ubia protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
    
 0.512
XALC_1328
Hypothetical protein.
       0.507
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.