Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
XALC_1333 | XALC_1336 | XALC_1333 | XALC_1336 | Putative enoyl-coa hydratase protein. | Conserved hypothetical protein. | 0.569 |
XALC_1333 | feoA | XALC_1333 | XALC_1334 | Putative enoyl-coa hydratase protein. | Probable ferrous iron transport protein. | 0.608 |
XALC_1333 | feoB | XALC_1333 | XALC_1335 | Putative enoyl-coa hydratase protein. | Probable ferrous iron transport protein feob; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.608 |
XALC_1336 | XALC_1333 | XALC_1336 | XALC_1333 | Conserved hypothetical protein. | Putative enoyl-coa hydratase protein. | 0.569 |
XALC_1336 | dapB | XALC_1336 | XALC_1337 | Conserved hypothetical protein. | Probable dihydrodipicolinate reductase (dhpr) protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.465 |
XALC_1336 | feoA | XALC_1336 | XALC_1334 | Conserved hypothetical protein. | Probable ferrous iron transport protein. | 0.835 |
XALC_1336 | feoB | XALC_1336 | XALC_1335 | Conserved hypothetical protein. | Probable ferrous iron transport protein feob; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.847 |
dapB | XALC_1336 | XALC_1337 | XALC_1336 | Probable dihydrodipicolinate reductase (dhpr) protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | Conserved hypothetical protein. | 0.465 |
dapB | feoA | XALC_1337 | XALC_1334 | Probable dihydrodipicolinate reductase (dhpr) protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | Probable ferrous iron transport protein. | 0.465 |
dapB | feoB | XALC_1337 | XALC_1335 | Probable dihydrodipicolinate reductase (dhpr) protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | Probable ferrous iron transport protein feob; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.465 |
feoA | XALC_1333 | XALC_1334 | XALC_1333 | Probable ferrous iron transport protein. | Putative enoyl-coa hydratase protein. | 0.608 |
feoA | XALC_1336 | XALC_1334 | XALC_1336 | Probable ferrous iron transport protein. | Conserved hypothetical protein. | 0.835 |
feoA | dapB | XALC_1334 | XALC_1337 | Probable ferrous iron transport protein. | Probable dihydrodipicolinate reductase (dhpr) protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.465 |
feoA | feoB | XALC_1334 | XALC_1335 | Probable ferrous iron transport protein. | Probable ferrous iron transport protein feob; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.998 |
feoB | XALC_1333 | XALC_1335 | XALC_1333 | Probable ferrous iron transport protein feob; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Putative enoyl-coa hydratase protein. | 0.608 |
feoB | XALC_1336 | XALC_1335 | XALC_1336 | Probable ferrous iron transport protein feob; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Conserved hypothetical protein. | 0.847 |
feoB | dapB | XALC_1335 | XALC_1337 | Probable ferrous iron transport protein feob; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Probable dihydrodipicolinate reductase (dhpr) protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.465 |
feoB | feoA | XALC_1335 | XALC_1334 | Probable ferrous iron transport protein feob; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Probable ferrous iron transport protein. | 0.998 |