STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_1410Putative two-component system response regulatory protein. (127 aa)    
Predicted Functional Partners:
XALC_1974
Putative two-component system sensor-response regulator hybrid protein.
 
 
 
 0.877
XALC_2101
Putative two-component system sensor-response regulator hybrid protein.
 
 
 
 0.875
XALC_0297
Hypothetical two-component system sensor-response regulator hybrid protein.
 
 
 
 0.845
fleQ
Probable flagellar sigma-54 dependent transcriptional activator fleq protein.
   
   0.819
XALC_1303
Probable two-component system sensor-response regulator hybrid protein.
 
 
 
 0.818
XALC_1435
Putative sensory box histidine kinase protein.
 
 
 0.802
rpoN1
Probable rna polymerase sigma-54 factor protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
     
 0.787
XALC_0897
Putative two-component system sensor transmembrane protein.
 
 
 0.704
XALC_1787
Probable two-component system regulatory protein, luxr family.
  
     0.654
XALC_1304
Probable two-component system regulatory protein, luxr family.
  
     0.613
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.