Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
XALC_0547 | XALC_1788 | XALC_0547 | XALC_1788 | Hypothetical secreted protein. | Hypothetical_protein. | 0.403 |
XALC_1787 | XALC_1788 | XALC_1787 | XALC_1788 | Probable two-component system regulatory protein, luxr family. | Hypothetical_protein. | 0.583 |
XALC_1787 | XALC_1789 | XALC_1787 | XALC_1789 | Probable two-component system regulatory protein, luxr family. | Hypothetical protein. | 0.495 |
XALC_1788 | XALC_0547 | XALC_1788 | XALC_0547 | Hypothetical_protein. | Hypothetical secreted protein. | 0.403 |
XALC_1788 | XALC_1787 | XALC_1788 | XALC_1787 | Hypothetical_protein. | Probable two-component system regulatory protein, luxr family. | 0.583 |
XALC_1788 | XALC_1789 | XALC_1788 | XALC_1789 | Hypothetical_protein. | Hypothetical protein. | 0.712 |
XALC_1788 | XALC_1790 | XALC_1788 | XALC_1790 | Hypothetical_protein. | Hypothetical protein. | 0.488 |
XALC_1788 | XALC_1996 | XALC_1788 | XALC_1996 | Hypothetical_protein. | Hypothetical protein. | 0.421 |
XALC_1788 | XALC_1997 | XALC_1788 | XALC_1997 | Hypothetical_protein. | Hypothetical protein. | 0.417 |
XALC_1788 | raxB1 | XALC_1788 | XALC_1791 | Hypothetical_protein. | ATP-binding cassette, subfamily B, bacterial RaxB; Probable abc transporter permease and atp-binding peptide transport system, abc transporter, atp-binding protein. | 0.467 |
XALC_1789 | XALC_1787 | XALC_1789 | XALC_1787 | Hypothetical protein. | Probable two-component system regulatory protein, luxr family. | 0.495 |
XALC_1789 | XALC_1788 | XALC_1789 | XALC_1788 | Hypothetical protein. | Hypothetical_protein. | 0.712 |
XALC_1789 | XALC_1790 | XALC_1789 | XALC_1790 | Hypothetical protein. | Hypothetical protein. | 0.568 |
XALC_1789 | raxB1 | XALC_1789 | XALC_1791 | Hypothetical protein. | ATP-binding cassette, subfamily B, bacterial RaxB; Probable abc transporter permease and atp-binding peptide transport system, abc transporter, atp-binding protein. | 0.438 |
XALC_1790 | XALC_1788 | XALC_1790 | XALC_1788 | Hypothetical protein. | Hypothetical_protein. | 0.488 |
XALC_1790 | XALC_1789 | XALC_1790 | XALC_1789 | Hypothetical protein. | Hypothetical protein. | 0.568 |
XALC_1790 | raxB1 | XALC_1790 | XALC_1791 | Hypothetical protein. | ATP-binding cassette, subfamily B, bacterial RaxB; Probable abc transporter permease and atp-binding peptide transport system, abc transporter, atp-binding protein. | 0.574 |
XALC_1996 | XALC_1788 | XALC_1996 | XALC_1788 | Hypothetical protein. | Hypothetical_protein. | 0.421 |
XALC_1996 | XALC_1997 | XALC_1996 | XALC_1997 | Hypothetical protein. | Hypothetical protein. | 0.992 |
XALC_1997 | XALC_1788 | XALC_1997 | XALC_1788 | Hypothetical protein. | Hypothetical_protein. | 0.417 |
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