STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_1978Hypothetical protein. (175 aa)    
Predicted Functional Partners:
XALC_1979
Hypothetical protein.
       0.796
XALC_1977
Putative n-acetyltransferase protein.
       0.775
XALC_1643
Hypothetical protein.
  
     0.753
XALC_3077
Hypothetical secreted protein.
 
     0.730
XALC_1271
Conserved hypothetical protein.
  
     0.710
XALC_0899
Conserved hypothetical protein.
  
     0.703
tolA
Probable biopolymer transport protein.
  
     0.699
XALC_1980
Putative n-acetylmuramoyl-l-alanine amidase protein.
 
     0.690
XALC_0407
Hypothetical protein.
  
     0.687
XALC_1707
Putative atp-binding_kinase_domain_fha protein.
 
     0.641
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.