STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_2010Putative transcriptional regulator transcription regulator protein. (148 aa)    
Predicted Functional Partners:
emrA
Probable multidrug resistance protein.
 
  
 0.733
emrB
Probable transmembrane multidrug resistance protein; Belongs to the major facilitator superfamily.
 
  
 0.700
XALC_2009
Putative outer membrane efflux protein.
       0.629
XALC_1974
Putative two-component system sensor-response regulator hybrid protein.
 
  
 0.502
XALC_0692
Hypothetical binding-protein-dependent transport systems inner membrane component;substrate-binding region of abc-type glycine betaine transport system.
  
  
 0.467
xsaN
Probable xanthomonas secretion apparatus. transcription regulator protein.
  
  
 0.467
XALC_0085
Putative two-component system sensor/regulator hybrid protein.
  
  
 0.456
XALC_2503
Conserved hypothetical protein.
  
   
 0.437
XALC_2101
Putative two-component system sensor-response regulator hybrid protein.
  
  
 0.404
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.