Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pilUProbable type iv pilus assembly protein atpase pilu. (376 aa)    
Predicted Functional Partners:
pilM
Probable type iv pilus assembly protein pilm.
  
  
 0.917
pilC
Probable fimbrial assembly protein.
 
   
 0.896
pilQ
Probable type iv pilus assembly protein pilq.
  
  
 0.859
pilN
Probable type iv pilus assembly protein piln.
  
  
 0.833
pilO
Probable pilus iv assembly membrane protein pilo.
  
  
 0.816
pilD
Probable type II secretory pathway prepilin signal peptidase protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
   
 0.807
PilP
Probable type iv pilus assembly protein pilp.
  
   
 0.806
xpsF
Probable general secretion pathway protein f.
 
   
 0.787
pilT
Putative type iv pilus assembly protein, pilus retraction atpase pilt.
 
  
0.783
pilS
Probable two-component system sensor protein pils.
  
   
 0.746
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.