STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_2553Conserved hypothetical protein. (123 aa)    
Predicted Functional Partners:
raxB1
ATP-binding cassette, subfamily B, bacterial RaxB; Probable abc transporter permease and atp-binding peptide transport system, abc transporter, atp-binding protein.
 
 
 0.872
raxB2
ATP-binding cassette, subfamily B, bacterial RaxB; Probable abc transporter permease and atp-binding peptide transport system, abc transporter, atp-binding protein.
 
 
 0.872
XALC_1904
Hypothetical protein.
 
 
 0.871
XALC_1903
Hypothetical protein.
 
 
 0.870
XALC_0740
Conserved hypothetical protein.
 
  
 0.788
XALC_2552
Hypothetical membrane protein.
       0.773
tolC
Probable outer membrane efflux protein.
  
 
 0.552
XALC_0344
Putative outer membrane efflux protein.
  
 
 0.465
XALC_1770
Probable outer membrane efflux protein.
  
 
 0.465
XALC_2009
Putative outer membrane efflux protein.
  
 
 0.465
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.