STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_3003Hypothetical protein. (338 aa)    
Predicted Functional Partners:
XALC_0007
Conserved hypothetical protein.
 
    0.748
XALC_2726
Putative tonb-dependent outer membrane receptor protein.
 
 
 
 0.747
XALC_3077
Hypothetical secreted protein.
  
 
   0.747
exbB
Probable biopolymer transport protein.
 
 
 0.743
XALC_0899
Conserved hypothetical protein.
  
     0.721
tolQ
Probable biopolymer transport tolq transmembrane protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.695
XALC_2237
Putative chemotaxis-related protein.
  
     0.685
XALC_1707
Putative atp-binding_kinase_domain_fha protein.
  
   
 0.683
XALC_0376
Hypothetical protein.
  
     0.675
XALC_2715
Conserved hypothetical protein.
 
 
 
 0.662
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.