STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_3044Putative feruloyl-coa-synthetase protein. (620 aa)    
Predicted Functional Partners:
XALC_1058
Probable non-ribosomal peptide synthetase protein.
 
 0.954
albI
Polyketide non-ribosomal peptide synthase; albicidin synthetase protein.
  
 0.954
XALC_1057
Probable non-ribosomal peptide synthetase protein.
  
 0.948
XALC_0772
Probable non-ribosomal peptide synthetase protein.
 
 
0.902
XALC_1551
Probable non-ribosomal peptide synthetase protein.
 
 
0.902
XALC_1056
Probable non-ribosomal peptide synthetase protein.
  
 
 0.897
XALC_3045
Putative enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.881
XALC_0364
Probable non-ribosomal peptide synthetase protein.
  
 
 0.843
XALC_1145
Probable non-ribosomal peptide synthetase protein.
  
 
 0.843
albIV
Amino acid adenylation;albicidin synthetase protein.
  
 
 0.819
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
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