STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XALC_3162Hypothetical protein. (249 aa)    
Predicted Functional Partners:
XALC_0084
Hypothetical atpase of the aaa+ class protein.
   
 0.848
tdk
Probable thymidine kinase protein.
       0.552
XALC_1057
Probable non-ribosomal peptide synthetase protein.
   
 
 0.496
XALC_1058
Probable non-ribosomal peptide synthetase protein.
   
 
 0.496
xanB
Probable mannose-6-phosphate isomerase protein; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.494
rep
Probable atp-dependent dna helicase protein; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.
       0.411
Your Current Organism:
Xanthomonas albilineans
NCBI taxonomy Id: 380358
Other names: X. albilineans GPE PC73, Xanthomonas albilineans GPE PC73, Xanthomonas albilineans str. GPE PC73, Xanthomonas albilineans strain GPE PC73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.