Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHA_0085 | codA | AHA_0085 | AHA_0082 | Conserved hypothetical protein; Identified by similarity to GB:BAC58359.1; match to protein family HMM PF06843. | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | 0.468 |
| AHA_0085 | crcB | AHA_0085 | AHA_0083 | Conserved hypothetical protein; Identified by similarity to GB:BAC58359.1; match to protein family HMM PF06843. | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.580 |
| AHA_0085 | tatA | AHA_0085 | AHA_0087 | Conserved hypothetical protein; Identified by similarity to GB:BAC58359.1; match to protein family HMM PF06843. | Twin arginine-targeting protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.676 |
| AHA_0085 | tatB | AHA_0085 | AHA_0088 | Conserved hypothetical protein; Identified by similarity to GB:BAC58359.1; match to protein family HMM PF06843. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.725 |
| AHA_0085 | tatC | AHA_0085 | AHA_0089 | Conserved hypothetical protein; Identified by similarity to GB:BAC58359.1; match to protein family HMM PF06843. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.694 |
| AHA_0085 | ubiB | AHA_0085 | AHA_0086 | Conserved hypothetical protein; Identified by similarity to GB:BAC58359.1; match to protein family HMM PF06843. | 2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.829 |
| AHA_0085 | ubiE | AHA_0085 | AHA_0084 | Conserved hypothetical protein; Identified by similarity to GB:BAC58359.1; match to protein family HMM PF06843. | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.905 |
| codA | AHA_0085 | AHA_0082 | AHA_0085 | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | Conserved hypothetical protein; Identified by similarity to GB:BAC58359.1; match to protein family HMM PF06843. | 0.468 |
| codA | crcB | AHA_0082 | AHA_0083 | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.618 |
| codA | tatA | AHA_0082 | AHA_0087 | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | Twin arginine-targeting protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.411 |
| codA | tatB | AHA_0082 | AHA_0088 | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.411 |
| codA | tatC | AHA_0082 | AHA_0089 | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.422 |
| codA | ubiB | AHA_0082 | AHA_0086 | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | 2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.624 |
| codA | ubiE | AHA_0082 | AHA_0084 | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.481 |
| crcB | AHA_0085 | AHA_0083 | AHA_0085 | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Conserved hypothetical protein; Identified by similarity to GB:BAC58359.1; match to protein family HMM PF06843. | 0.580 |
| crcB | codA | AHA_0083 | AHA_0082 | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | 0.618 |
| crcB | tatA | AHA_0083 | AHA_0087 | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Twin arginine-targeting protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.541 |
| crcB | tatB | AHA_0083 | AHA_0088 | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.541 |
| crcB | tatC | AHA_0083 | AHA_0089 | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.572 |
| crcB | ubiB | AHA_0083 | AHA_0086 | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.598 |
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