STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_0205Evolved beta-galactosidase alpha-subunit; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; match to protein family HMM PF02929. (1024 aa)    
Predicted Functional Partners:
AHA_0206
Evolved beta-D-galactosidase, beta subunit; Identified by match to protein family HMM PF04074.
   
 0.989
AHA_1897
Alpha-galactosidase; Identified by match to protein family HMM PF02065.
 
 
 0.942
lacZ
Beta-galactosidase; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; match to protein family HMM PF02929; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.918
glk
Glucokinase; Identified by match to protein family HMM PF02685; match to protein family HMM TIGR00749; Belongs to the bacterial glucokinase family.
     
 0.903
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.741
AHA_2347
1-phosphofructokinase; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.686
AHA_0207
Inner membrane transporter YgjI; Identified by match to protein family HMM PF00324.
 
   
 0.635
AHA_0204
HTH-type transcriptional regulator EbgR; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.
 
   
 0.549
AHA_2689
Beta-glucosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915; Belongs to the glycosyl hydrolase 3 family.
 
   
 0.544
AHA_3587
Conserved hypothetical protein; Identified by similarity to GB:CAG73302.1; match to protein family HMM PF04074; match to protein family HMM TIGR00022.
   
 
 0.486
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.