Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AHA_0396 | AHA_0492 | Msha pilin protein mshc; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | Sulfatase; Identified by match to protein family HMM PF00884. | 0.410 |
AHA_0435 | AHA_0492 | Sensory transduction protein kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672. | Sulfatase; Identified by match to protein family HMM PF00884. | 0.442 |
AHA_0492 | AHA_0396 | Sulfatase; Identified by match to protein family HMM PF00884. | Msha pilin protein mshc; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | 0.410 |
AHA_0492 | AHA_0435 | Sulfatase; Identified by match to protein family HMM PF00884. | Sensory transduction protein kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672. | 0.442 |
AHA_0492 | AHA_0493 | Sulfatase; Identified by match to protein family HMM PF00884. | Hypothetical protein; Identified by Glimmer2; putative. | 0.444 |
AHA_0492 | AHA_1080 | Sulfatase; Identified by match to protein family HMM PF00884. | Conserved hypothetical protein. | 0.422 |
AHA_0493 | AHA_0492 | Hypothetical protein; Identified by Glimmer2; putative. | Sulfatase; Identified by match to protein family HMM PF00884. | 0.444 |
AHA_1080 | AHA_0492 | Conserved hypothetical protein. | Sulfatase; Identified by match to protein family HMM PF00884. | 0.422 |